From extreme environments to bioactive discoveries: Unveiling the potential of Antarctic bacteria
Stanislava Bezdicek Kralova (Speaker), Mathias Flieder (Contributor), Peter Spacek (Contributor), Johannes Gafriller (Contributor), Ulrike Grienke (Contributor), Olga Sekurova (Contributor), Thomas Rattei (Contributor), Martin Zehl (Contributor), Sergey Zotchev (Contributor) & Alexander Loy (Contributor)
Activity: Talks and presentations › Talk or oral contribution › Science to Science
Visualizing cross-feeding interactions in community metabolic models
Michael Predl (Speaker), Marianne Mießkes (Contributor), Jürgen Zanghellini (Contributor) & Thomas Rattei (Contributor)
Activity: Talks and presentations › Talk or oral contribution › Science to Science
Large-scale prediction of phenotypic traits from metagenomic bins
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Science to Science
Metagnome wide prediction of Type III secreted proteins
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Science to Science
VOGDB- Virus Orthologous Groups
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Science to Science
Genomics of uncultivable microbes
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Science to Science
Computational modeling and learning methods for metagenomics of microbial and viral communities
Thomas Rattei (Invited speaker)
Activity: Talks and presentations › Talk or oral contribution › Science to Science
Computational modeling and learning methods for metagenomics of microbial and viral communities
Thomas Rattei (Invited speaker)
Activity: Talks and presentations › Talk or oral contribution › Science to Public
Computational infrastructure in life sciences
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Science to Science
Die unbekannte Welt der MIkrobiome: Von der Umwelt zum Menschen
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Science to Public
Polyproteins: an obstacle for virus genome annotation
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Science to Science
Microbiomes in high definition
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Science to Science
2nd Meeting of the ATBI workgroup infrastructure and HPC
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Science to Science
Software Infrastructure for bioinformatics on LISC and VSC
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Science to Science
How many bioinformaticians does it take to make a product ?
Thomas Rattei (Invited speaker)
Activity: Talks and presentations › Talk or oral contribution › Science to Science
CUBE - Division of Computational Systems Biology
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Science to Public
Viral Protein Families
Thomas Rattei (Invited speaker)
Activity: Talks and presentations › Talk or oral contribution › Science to Science
Deciphering the microbiome
Thomas Rattei (Invited speaker)
Activity: Talks and presentations › Talk or oral contribution › Science to Science
CUBE-Division of Computational Systems Biolog<
Thomas Rattei (Invited speaker)
Activity: Talks and presentations › Talk or oral contribution › Science to Public
Large-scale prediction of microbial roles and traits
Thomas Rattei (Invited speaker)
Activity: Talks and presentations › Talk or oral contribution › Science to Science
Recent developments in bioinformatics in A and EU
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Science to Science
Viral Protein Families
Thomas Rattei (Invited speaker)
Activity: Talks and presentations › Talk or oral contribution › Science to Science
Challenges and recent approaches in viral metagenomics
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Science to Science
Microbiomes in high definition
Thomas Rattei (Invited speaker)
Activity: Talks and presentations › Talk or oral contribution › Science to Science
Next Generation Bioinformatics for Genome-based Diagnostics
Thomas Rattei (Invited speaker)
Activity: Talks and presentations › Talk or oral contribution › Science to Science
The million genomes challenge: Large-scale annotation and phenotype prediction for microbial genomes.
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
The Chlamydiae Genomes Reannotation Initiative.
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
The million genomes challenge: Large-scale annotation and phenotype prediction for microbial genomes.
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Microbial genomes inside the mummy of the Iceman.
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Bioinformatics in Austria and ELIXIR.
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
How clonal are bacterial infections?
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
From genomes to networks: computational approaches for studying host-microbe interactions.
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
The million genomes challenge: bioinformatics and HPC in microbial genomics.
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Microbiomes: from genomes to structure and function.
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
From gene-centric to genome-centric metagenomics: new computational approaches and tools
Thomas Rattei (Invited speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Status update on the bioinformatics community in Austria
Thomas Rattei (Invited speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
The future of microbial genomics: next-generation bioinformatics for millions of genomes
Thomas Rattei (Invited speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Mission accomplished? Critical evaluation of computational methods in metagenomics
Thomas Rattei (Invited speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
From genomes to networks: computational approaches for studying microbe-host interactions.
Thomas Rattei (Invited speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
CAMI-how to post it to the bench
Thomas Rattei (Invited speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
From genomes to networks; computational approaches for studying microbe-host interactions
Thomas Rattei (Invited speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Chlamydia genomes re-annotation project
Thomas Rattei (Invited speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Bioinformatics for Biochemists
Thomas Rattei (Invited speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Metagenomics is individual
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Bioinformatics for metagenomics and microbiome analyses
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Computational methods for metagenomics and metatranscriptomics
Thomas Rattei (Invited speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
The million genomes challenge
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Bioinformatics for microbiome analysis
Thomas Rattei (Invited speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Critical Assessment of Metagenomic Information
Thomas Rattei (Invited speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Wie beeinflussen die Gene unser Leben?
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Crowdsourcing research
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Computational Methods and infrastructures for post-processing of massive parallel data sets
Thomas Rattei (Invited speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Microbial Me[GT]agenomics
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Bioinformatische Verfahren zur Auswertung massiv paralleler Genomdaten
Thomas Rattei (Invited speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Computational Methods for Metagenomics
Thomas Rattei (Invited speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Bacterial Host-Pathogen Interactions
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Angewandte Bioinformatik
Thomas Rattei (Invited speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Resources in Bioinformatics, Microbial Genomes
Thomas Rattei (Invited speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Viral genomics and metagenomics
Thomas Rattei (Invited speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
SIMAP - structuring the network of protein similarities
Thomas Rattei (Invited speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Bacterial protein secretion- key factor in host-pathogen interactions
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Mastering the data avalanche: bioinformatics in archaeal (meta-)genomics
Thomas Rattei (Invited speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
In silico interpretation of microbial (meta-)genomes and ist improvement by proteomic data
Thomas Rattei (Invited speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Computational methods for microbial and environmental genomics
Thomas Rattei (Invited speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Comparative genomics and metagenomics of viruses
Thomas Rattei (Invited speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Wie beeinflussen die Gene unser Leben?
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Krank durch unsere Gene?
Thomas Rattei (Invited speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Die unsichtbare Welt um uns
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Bacterial protein secretion- key factor in host-pathogen interactions
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Bioinformatics for NGS: from data management and error correction to medical interpretation
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Bacterial protein secretion- key factor in host-pathogen interactions
Thomas Rattei (Invited speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Bioinformatics for microbial ecology
Thomas Rattei (Invited speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Microbial Me[GT]agenomics
Thomas Rattei (Invited speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Databases and resources in Bioinformatics
Thomas Rattei (Invited speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Microbial Genomics
Thomas Rattei (Invited speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Bacterial protein secretion
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Bacterial protein secretion
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Bioinformatics for micro RNA expression analysis: from RNAseq data to regulatory networks
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
The Department of Computational Systems Biology
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Hochdimensionale Datenräume in Genomik und Metagenomik
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
The dynamic evolution of protein-protein interaction networks
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Computational methods in Next-Generation Sequencing
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
The iceman metagenome
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Computational challenges in genomics and metagenomics
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Bioinformatics for metagenomics
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Pathogen-Host metabolomics and interactomics
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Microbial (meta-)genomics: From sequence analysis to complex networks
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Bacterial protein secretion Key factor in host-pathogen interactions
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Pathogen-Host interactions: Role(s) of RNAs?
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Computer meets EB’s and RB’s Genomics and transcriptomics of Chlamydia pneumoniae
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Microbial (meta-)genomics: From sequence analysis to complex networks
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Pathogen-host metabolomics and interactomics
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Genetic factors of C. pneumoniae tissue tropism
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Tools for the computational interpretation of microbial genomes
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Microbial (meta-)genomics: From sequence analysis to complex networks
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Computer-Modelle lebender Zellen: Realitaet oder Fiktion?
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Computational interpretation of genomes and metagenomes.
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Beitrag der Bioinformatik zur Identifikation von Biomarkern - Techniken und Herausforderungen aus Sicht der Bioinformatik.
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Fehlerquellen und Sequenzierungsqualitaet bei NGS.
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
In silico prediction of type 3 secreted proteins.
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Bioinformatik als Schlusseldisziplin im Zeitalter der molekularen und systemorientierten Biologie.
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Digital biology: from sequence analysis to computational systems biology.
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
In silico interpretation of microbial (meta-)genomes and its improvement through proteomic data.
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Genome und Proteome als bioinformatische Herausforderung.
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Bioinformatics for microbial (pan-)genomics and the investigation of pathogenic bacteria.
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
The Department of Computational Systems Biology.
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Complete genome sequences of Chlamydia pneumoniae clinical isolates reveal a highly clonal pan-genome.
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Pathogen-hostmetabolomics and interactomics.
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Other
Deciphering the microbiome: Large-scale prediction of mikrobial roles and traits
Thomas Rattei (Speaker)
Activity: Talks and presentations › Talk or oral contribution › Science to Science
PROSPECTOMICS: Using Omics Techniques for Hydrocarbon Prospecting
1/01/21 → 30/06/24
Project: Research funding
Understanding (harmful) virus-host interactions by linking virology and bioinformatics
1/09/20 → 31/08/24
Project: Research funding
Microbial symbioses in dynamic environments: Metabolic interplay and novel interactions
Berry, D., Bright, M., Bulgheresi, S., Daims, H., Horn, M., Köllensperger, G., Loy, A., Petersen, J., Rattei, T., Wagner, M., Wienkoop, S. & Wöbken, D.
1/10/19 → 30/09/24
Project: Research funding
MICDIF: Linking Microbial Diversity and Functions across Scales and Ecosystems
Richter, A., Battin, T., Daims, H., Wagner, M., Strauss, J., Sterflinger-Gleixner, K., Riedel, K., Eberl, L., Psenner, R., Zechmeister-Boltenstern, S., Jandl, R., Wanek, W., Obersteiner, M., Schmid, E., Schleper, C. & Rattei, T.
1/12/06 → 30/11/09
Project: Research funding
Department of Theoretical Chemistry
Währinger Straße 17
1090 Wien
T: +43-1-4277-91280