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Benkhoff, M., Barcik, M., Mourikis, P., Dahlmanns, J., Kahmann, P., Wollnitzke, P., Hering, M., Huckenbeck, T., Hoppe, J., Semleit, N., Deister-Jonas, J., Zako, S., Seel, J., Coman, C., Barth, M., Cramer, M., Helten, C., Wildeis, L., Hu, H., ... Polzin, A. (2025). Targeting Sphingosine-1-Phosphate Signaling to Prevent the Progression of Aortic Valve Disease. Circulation, 151(4), 333-347. https://doi.org/10.1161/CIRCULATIONAHA.123.067270

National Institute of Standards and Technology, Torta, F., Hoffmann, N., Burla, B., Alecu, I., Arita, M., Bamba, T., Bennett, S. A. L., Bertrand-Michel, J., Brügger, B., Cala, M. P., Camacho-Muñoz, D., Checa, A., Chen, M., Chocholoušková, M., Cinel, M., Chu-Van, E., Colsch, B., Coman, C., ... Wenk, M. R. (2024). Concordant inter-laboratory derived concentrations of ceramides in human plasma reference materials via authentic standards. Nature Communications, 15(1), Artikel 8562. https://doi.org/10.1038/s41467-024-52087-x

Skotland, T., Ekroos, K., McDonald, J., Ahrends, R., Liebisch, G., & Sandvig, K. (2024). Pitfalls in lipid mass spectrometry of mammalian samples — a brief guide for biologists. Nature Reviews Molecular Cell Biology, 25(10), 759-760. https://doi.org/10.1038/s41580-024-00758-4

Kopczynski, D., Ejsing, C. S., McDonald, J. G., Bamba, T., Baker, E. S., Bertrand-Michel, J., Brügger, B., Coman, C., Ellis, S. R., Garrett, T. J., Griffiths, W. J., Guan, X. L., Han, X., Höring, M., Holčapek, M., Hoffmann, N., Huynh, K., Lehmann, R., Jones, J. W., ... Liebisch, G. (2024). The lipidomics reporting checklist a framework for transparency of lipidomic experiments and repurposing resource data. Journal of Lipid Research, 65(9), Artikel 100621. https://doi.org/10.1016/j.jlr.2024.100621

Rubenzucker, S., Manke, M. C., Lehmann, R., Assinger, A., Borst, O., & Ahrends, R. (2024). A Targeted, Bioinert LC-MS/MS Method for Sensitive, Comprehensive Analysis of Signaling Lipids. Analytical Chemistry, 96(23), 9643-9652. https://doi.org/10.1021/acs.analchem.4c01388

Kumar, M., Has, C., Lam-Kamath, K., Ayciriex, S., Dewett, D., Bashir, M., Poupault, C., Schuhmann, K., Thomas, H., Knittelfelder, O., Raghuraman, B. K., Ahrends, R., Rister, J., & Shevchenko, A. (2024). Eye proteome of Drosophila melanogaster. Proteomics, 24(10), Artikel 2300330. https://doi.org/10.1002/pmic.202300330

Kumar, M., Has, C., Lam-Kamath, K., Ayciriex, S., Dewett, D., Bashir, M., Poupault, C., Schuhmann, K., Thomas, H., Knittelfelder, O., Raghuraman, B. K., Ahrends, R., Rister, J., & Shevchenko, A. (2024). Lipidome Unsaturation Affects the Morphology and Proteome of the Drosophila Eye. Journal of Proteome Research, 23(4), 1188-1199. https://doi.org/10.1021/acs.jproteome.3c00570

Heimerl, S., Höring, M., Kopczynski, D., Sigruener, A., Hart, C., Burkhardt, R., Black, A., Ahrends, R., & Liebisch, G. (2023). Quantification of bulk lipid species in human platelets and their thrombin-induced release. Scientific Reports, 13(1), Artikel 6154. https://doi.org/10.1038/s41598-023-33076-4

Kopczynski, D., Hoffmann, N., Troppmair, N., Coman, C., Ekroos, K., Kreutz, M. R., Liebisch, G., Schwudke, D., & Ahrends, R. (2023). LipidSpace: Simple Exploration, Reanalysis, and Quality Control of Large-Scale Lipidomics Studies. Analytical Chemistry, 95(41), 15236-15244. https://doi.org/10.1021/acs.analchem.3c02449

Troppmair, N., Kopczynski, D., Assinger, A., Lehmann, R., Coman, C., & Ahrends, R. (2023). Accurate Sphingolipid Quantification Reducing Fragmentation Bias by Nonlinear Models. Analytical Chemistry, 95(41), 15227-15235. https://doi.org/10.1021/acs.analchem.3c02445

de Jonckheere, B., Kollotzek, F., Münzer, P., Göb, V., Fischer, M., Mott, K., Coman, C., Troppmair, N. N., Manke, M. C., Zdanyte, M., Harm, T., Sigle, M., Kopczynski, D., Bileck, A., Gerner, C., Hoffmann, N., Heinzmann, D., Assinger, A., Gawaz, M., ... Ahrends, R. (2023). Critical shifts in lipid metabolism promote megakaryocyte differentiation and proplatelet formation. Nature Cardiovascular Research, 2(9), 835-852. https://doi.org/10.1038/s44161-023-00325-8

Foest, D., Knodel, A., Ahrends, R., Coman, C., Franzke, J., & Brandt, S. (2023). Flexible Microtube Plasma for the Consecutive-Ionization of Cholesterol in Nano-Electrospray Mass Spectrometry. Analytical Chemistry, 95(22), 8423-8432. https://doi.org/10.1021/acs.analchem.2c04052

Wang, Q., Hoene, M., Hu, C., Fritsche, L., Ahrends, R., Liebisch, G., Ekroos, K., Fritsche, A., Birkenfeld, A. L., Liu, X., Zhao, X., Li, Q., Su, B., Peter, A., Xu, G., & Lehmann, R. (2023). Ex vivo instability of lipids in whole blood: preanalytical recommendations for clinical lipidomics studies. Journal of Lipid Research, 64(6), Artikel 100378. https://doi.org/10.1016/j.jlr.2023.100378

Cheung, H. Y. F., Zou, J., Tantiwong, C., Fernandez, D. I., Huang, J., Ahrends, R., Roest, M., Cavill, R., Gibbins, J., & Heemskerk, J. W. M. (2023). High-throughput assessment identifying major platelet Ca²⁺ entry pathways via tyrosine kinase-linked and G protein-coupled receptors. Cell Calcium, 112, Artikel 102738. https://doi.org/10.1016/j.ceca.2023.102738

Ni, Z., Wolk, M., Jukes, G., Espinosa, K. M., Ahrends, R., Aimo, L., Alvarez-Jarreta, J., Andrews, S., Andrews, R., Bridge, A., Clair, G. C., Conroy, M. J., Fahy, E., Gaud, C., Goracci, L., Hartler, J., Hoffmann, N., Kopczynski, D., Korf, A., ... Fedorova, M. (2023). Guiding the choice of informatics software and tools for lipidomics research applications. Nature Methods, 20(2), 193-204. https://doi.org/10.1038/s41592-022-01710-0

Manke, M.-C., Ahrends, R., & Borst, O. (2022). Platelet lipid metabolism in vascular thrombo-inflammation. Clinical Pharmacology and Therapeutics, 237, Artikel 108258. https://doi.org/10.1016/j.pharmthera.2022.108258

McDonald, J. G., Ejsing, C. S., Kopczynski, D., Holcapek, M., Aoki, J., Arita, M., Arita, M., Baker, E. S., Bertrand-Michel, J., Bowden, J. A., Brugger, B., Ellis, S. R., Fedorova, M., Griffiths, W. J., Han, X., Hartler, J., Hoffmann, N., Koelmel, J. P., Kofeler, H. C., ... Ekroos, K. (2022). Introducing the Lipidomics Minimal Reporting Checklist. Nature Metabolism, 4(9), 1086-1088. https://doi.org/10.1038/s42255-022-00628-3

Kumar, M., Has, C., Lam-Kamath, K., Ayciriex, S., Dewett, D., Bashir, M., Poupault, C., Schuhmann, K., Knittelfelder, O., Raghuraman, B. K., Ahrends, R., Rister, J., & Shevchenko, A. (2022). Vitamin A Deficiency Alters the Phototransduction Machinery and Distinct Non-Vision-Specific Pathways in the Drosophila Eye Proteome. Biomolecules, 12(8), Artikel 1083. https://doi.org/10.3390/biom12081083

Hoffmann, N., Mayer, G., Has, C., Kopczynski, D., Al Machot, F., Schwudke, D., Ahrends, R., Marcus, K., Eisenacher, M., & Turewicz, M. (2022). A Current Encyclopedia of Bioinformatics Tools, Data Formats and Resources for Mass Spectrometry Lipidomics. Metabolites, 12(7), Artikel 584. https://doi.org/10.3390/metabo12070584