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Assoz. Prof. Mark Manuel Somoza, Privatdoz. B.Sc. MSc PhD
T: +43-1-4277-52643
Sommersemester 2022
270165 VO+SE Nucleic Acid Biotechnology
Sommersemester 2021
270128 PR Biotechnologie Praktikum
270165 VO+SE Nucleic Acid Biotechnology
Lietard, J., Ameur, D., & Somoza, M. M. (2022). Sequence-dependent quenching of fluorescein fluorescence on single-stranded and double-stranded DNA. Rsc advances, 12(9), 5629-5637. https://doi.org/10.1039/d2ra00534d
Lieder, B., Conka, J., Mistlberger-Reiner, A., Zabel, V., Ameur, D., Somoza, M. M., Sebekova, K., Celec, P., & Somoza, V. (2022). Long-Term Consumption of a Sugar-Sweetened Soft Drink in Combination with a Western-Type Diet Is Associated with Morphological and Molecular Changes of Taste Markers Independent of Body Weight Development in Mice. Nutrients, 14(3), [594]. https://doi.org/10.3390/nu14030594
Kolton, M., Weston, D. J., Mayali, X., Weber, P. K., McFarlane, K. J., Pett-Ridge, J., Somoza, M. M., Lietard, J., Glass, J. B., Lilleskov, E. A., Shaw, A. J., Tringe, S., Hanson, P. J., & Kostka, J. E. (2022). Defining the Sphagnum Core Microbiome across the North American Continent Reveals a Central Role for Diazotrophic Methanotrophs in the Nitrogen and Carbon Cycles of Boreal Peatland Ecosystems. mBio, 13(1), [e03714-21].
Tiroch, J., Sterneder, S., Di Pizio, A., Lieder, B., Hoelz, K., Holik, A. K., Pignitter, M., Behrens, M., Somoza, M., Ley, J. P., & Somoza, V. (2021). Bitter Sensing TAS2R50 Mediates the trans-Resveratrol-Induced Anti-inflammatory Effect on Interleukin 6 Release in HGF-1 Cells in Culture. Journal of Agricultural and Food Chemistry, 69(45), 13339-13349. https://doi.org/10.1021/acs.jafc.0c07058
Schaudy, E., Lietard, J., & Somoza, M. M. (2021). Sequence Preference and Initiator Promiscuity for De Novo DNA Synthesis by Terminal Deoxynucleotidyl Transferase. ACS Synthetic Biology, 10(7), 1750-1760. https://doi.org/10.1021/acssynbio.1c00142
Lietard, J., Leger, A., Erlich, Y., Sadowski, N., Timp, W., & Somoza, M. M. (2021). Chemical and photochemical error rates in light-directed synthesis of complex DNA libraries. Nucleic Acids Research, 49(12), 6687-6701. https://doi.org/10.1093/nar/gkab505
Holik, A-K., Schweiger, K., Stoeger, V., Lieder, B., Reiner, A., Zopun, M., Hoi, J. K., Kretschy, N., Somoza, M. M., Kriwanek, S., Pignitter, M., & Somoza, V. (2021). Gastric Serotonin Biosynthesis and Its Functional Role in L-Arginine-Induced Gastric Proton Secretion. International Journal of Molecular Sciences, 22(11), [5881]. https://doi.org/10.3390/ijms22115881
Antkowiak, P. L., Lietard, J., Darestani, M. Z., Somoza, M. M., Stark, W. J., Heckel, R., & Grass, R. N. (2020). Low cost DNA data storage using photolithographic synthesis and advanced information reconstruction and error correction. Nature Communications, 11(1), [5345]. https://doi.org/10.1038/s41467-020-19148-3
Schaudy, E., Somoza, M. M., & Lietard, J. (2020). l-DNA Duplex Formation as a Bioorthogonal Information Channel in Nucleic Acid-Based Surface Patterning. Chemistry: A European Journal. https://doi.org/10.1002/chem.202001871
Walker, J. M., Mennella, I., Ferracane, R., Tagliamonte, S., Holik, A-K., Hoelz, K., Somoza, M. M., Somoza, V., Fogliano, V., & Vitaglione, P. (2020). Melanoidins from coffee and bread differently influence energy intake: A randomized controlled trial of food intake and gut-brain axis response. Journal of Functional Foods, 72, [104063]. https://doi.org/10.1016/j.jff.2020.104063
Stoeger, V., Holik, A-K., Hoelz, K., Dingjan, T., Hans, J., Ley, J. P., Krammer, G. E., Niv, M. Y., Somoza, M. M., & Somoza, V. (2020). Bitter-Tasting Amino Acids L-Arginine and L-Isoleucine Differentially Regulate Proton Secretion via T2R1 Signaling in Human Parietal Cells in Culture. Journal of Agricultural and Food Chemistry, 68(11), 3434-3444. https://doi.org/10.1021/acs.jafc.9b06285
Hoelz, K., Pavlic, A., Lietard, J., & Somoza, M. M. (2019). Specificity and Efficiency of the Uracil DNA Glycosylase-Mediated Strand Cleavage Surveyed on Large Sequence Libraries. Scientific Reports, 9, [17822]. https://doi.org/10.1038/s41598-019-54044-x
Lietard, J., Damha, M. J., & Somoza, M. M. (2019). Large-Scale Photolithographic Synthesis of Chimeric DNA/RNA Hairpin Microarrays To Explore Sequence Specificity Landscapes of RNase HII Cleavage. Biochemistry, 58(44), 4389-4397. https://doi.org/10.1021/acs.biochem.9b00806
Zaunschirm, M., Pignitter, M., Kopic, A., Kessler, C., Hochkogler, C., Kretschy, N., Somoza, M. M., & Somoza, V. (2019). Exposure of Human Gastric Cells to Oxidized Lipids Stimulates Pathways of Amino Acid Biosynthesis on a Genomic and Metabolomic Level. Molecules, 24(22). https://doi.org/10.3390/molecules24224111
Hoi, J. K., Lieder, B., Pignitter, M., Hans, J., Ley, J. P., Lietard, J., Hoelz, K., Somoza, M., & Somoza, V. (2019). Identification of Cinnamaldehyde as Most Effective Fatty Acid Uptake Reducing Cinnamon-Derived Compound in Differentiated Caco-2 Cells Compared to Its Structural Analogues Cinnamyl Alcohol, Cinnamic Acid, and Cinnamyl Isobutyrate. Journal of Agricultural and Food Chemistry, 67(42), 11638-11649. https://doi.org/10.1021/acs.jafc.9b04274
Hoelz, K., Schaudy, E., Lietard, J., & Somoza, M. M. (2019). Multi-level patterning nucleic acid photolithography. Nature Communications, 10, [3805]. https://doi.org/10.1038/s41467-019-11670-3
Mayali, X., Weber, P. K., Nuccio, E., Lietard, J., Somoza, M., Blazewicz, S. J., & Pett-Ridge, J. (2019). Chip-SIP: Stable Isotope Probing Analyzed with rRNA-Targeted Microarrays and NanoSIMS. in M. Dumont, & M. Hernández García (Hrsg.), Stable Isotope Probing: Methods and Protocols (Band 2046, S. 71-87). Springer-Nature. Methods in Molecular Biology Band 2046 https://doi.org/10.1007/978-1-4939-9721-3_6
Lietard, J., Schaudy, E., Hölz, K., Ameur, D., & Somoza, M. M. (2019). High-Density DNA and RNA microarrays - Photolithographic Synthesis, Hybridization and Preparation of Large Nucleic Acid Libraries. Journal of Visualized Experiments, (150), [59936]. https://doi.org/10.3791/59936
Lietard, J., & Somoza, M. M. (2019). Spotting, Transcription and In Situ Synthesis: Three Routes for the Fabrication of RNA Microarrays. Computational and Structural Biotechnology Journal, 17, 862-868. https://doi.org/10.1016/j.csbj.2019.06.004
Lietard, J., Damha, M. J., & Somoza, M. M. (2019). Advances in Light‐Directed Synthesis of High‐Density Microarrays and Extension to RNA and 2′F‐ANA Chemistries. in J. Fernández‐Lucas, & M-J. C. Rius (Hrsg.), Enzymatic and Chemical Synthesis of Nucleic Acid Derivatives (S. 291-312). Wiley VCH. https://doi.org/10.1002/9783527812103.ch11
Bioanalytical applications of nucleic acid photolithography
Mark Manuel Somoza (Invited speaker)
29 Juni 2021
Aktivität: Vorträge › Vortrag › Science to Science
Ultra-large scale photolithographic synthesis of nucleic acids
Mark Manuel Somoza (Invited speaker)
19 Mai 2021
Aktivität: Vorträge › Vortrag › Science to Science
Impact of NƐ-Carboxymethyllysine on serotonin release from differentiated Caco-2cells
Ann-Katrin Holik (Vortragende*r), Barbara Lieder (Autor*in), Nicole Kretschy (Autor*in), Mark Manuel Somoza (Autor*in), Jakob P. Ley (Autor*in), Joachim Hans (Autor*in) & Veronika Somoza (Autor*in)
25 Aug. 2017
Aktivität: Vorträge › Vortrag › Science to Science
Fabrication of Thrombin-binding aptamers containing 2'-Fluoroarabinonucleic acids (2'F-ANAs) on High-Density DNA Microarrays
Mark Manuel Somoza (Autor*in)
19 Juli 2016
Aktivität: Vorträge › Vortrag › Andere
Nonivamide, a capsaicin analog, increases dopamine and serotonin release in SH-SY5Y cells via a TRPV1- independent pathway
Mark Manuel Somoza (Autor*in)
22 Aug. 2012
Aktivität: Vorträge › Vortrag › Andere
In situ, light-directed synthesis of high-density RNA microarrays
Mark Manuel Somoza (Invited speaker)
29 Sep. 2011
Aktivität: Vorträge › Vortrag › Andere
In situ, light-directed synthesis of high-density RNA microarrays
Mark Manuel Somoza (Vortragende*r)
4 Sep. 2011
Aktivität: Vorträge › Vortrag › Andere
In situ, light-directed synthesis of high-density RNA microarrays
Mark Manuel Somoza (Vortragende*r)
30 Juni 2011
Aktivität: Vorträge › Vortrag › Andere
Synthesis of High-Density RNA Microarrays
Mark Manuel Somoza (Invited speaker)
5 Juni 2011
Aktivität: Vorträge › Vortrag › Andere
Ribosomale Synthese von hochdichten Peptid Microarrays und modifizierte mRNA Anwendungen
4/09/17 → 3/09/22
Projekt: Forschungsförderung
Institut für Anorganische Chemie
Josef-Holaubek-Platz 2 (UZA II)
1090 Wien
Zimmer: 2A553
T: +43-1-4277-52643